Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924424.1_cds_XP_016472775.1_64975
CDS Infomation

[gene=LOC107794768] [db_xref=GeneID:107794768] [protein=translation initiation factor IF-2-like] [protein_id=XP_016472775.1] [location=join(30557..30676,30739..32019,35962..36039,36127..36261)] [gbkey=CDS]
Sequence

ATGGACCCATCCATGGATCTACCGACGACCACCGAATCACCGACGTTTAACTCAGCTCAA
GTTGTAAACCATGCTCCTACCCCTACCCCTCCTCAACCCCNATACGAAGAAATTTTGCGA
ATGATAACGGCGGCGATAACGGCGTTAAAGGAGAGGGATGGGTCAAGCAGGATAGCCATA
GCTAAGTACATAGACCGAGTCTACACAAATCTTCCACCGAATCACTCGGCCCTGTTGACT
CACCATCTTAAGCGTTTGAAGAACAGTGGTTACCTTGCTATGGTCAAACACTCTTACATG
CTCGCCGGACCACCTGGATCTGCTCCTCCGCCTCCTTCCGCCGACGCCGATTCCAACGGT
GTTGGTACTGATGTTTCTTCTCTTTCTAAAAGGAAACCTGGTCGTCCTCCTAAGCTCAAG
CCTGAGGCCCAACCTCATGCTCAGCCTCAAGTCCAAGCTCAAGTCCAATTTCAAGACCAA
TTCCAAGCTCAGCTTCAAGCCCAGCTTCAAGCCCAACTTCAAGCCCAACAGCAGCAAGCA
GCCCAGTTTCAACCTCAATTCCAACTCATCCAACAACAGCCCCAGTACTTACCTCAACAA
CAGTTCCAGCCCGACCCATTACTCCAACCTCAGCAACAGTTCCAGACCCAGCCACAGACG
CAGGCCTATGCTACTCCTGAAGGCCATAATTATGCTGGCCTTGGCGCTGAATCCGTGTTT
GTTTCTCTTGGGCTAGCTGATGGGCCTGTTGGAGTTCAGAATCCTGCTGTTGGGCTGGCT
CCGGCACCGGGAGCTGAAGAGAGTACGGCAAAGAGACGACCAGGTCGTCCCCGTAAGGAT
GGTTCCACTGTGGTTAAACCGGTGGAACCCAAATTACCGGACCAGAGCGGTGGTAGTAAG
AGGAGACCTGGTCGTCCTCCTAAGAGTGTGACAGTTAATGCTGCTCCTGGATCAGCTATG
GGTTCTGGACGACGAGGTCGGCCCAGGAAAAATTCTGTTCCTGGACGACGAGGTCGGCCC
AGGAAGAATGCGGCTGTTGCTGCTGCCAATGGCGGTGCCAATGTCGCAAATATTCCTTCT
GTTGGTGCCAATGTGACCAATGTTCCAGCTGGTGGTGTCCCGGGAGCCATAACAACACCT
AAACGAAGGGGACGGCCACCAAGGTCTAGTGGACCTCCTGCTGCTACTGTGGGTGTTACA
GATGTGCCTATTGCTGCTGCTTTTGATACGGAAAACTTGCCTAATGCTGTTGGTGGTGGC
GGTGTCACAAATAATGGGGCTCTGCCTCCCCTCGGAAAGCGACGTGGACGGCCTCCAAAA
TCTTACGGCGCTGCAGCCGCTGCTCCTACTGTTAAGAGACCCAGGAAGCTTTCTGGAAAA
CCTCTGGGTCGACCTAGAAAGAATGTGACATCCCCTGCAGTTTCGGACCCCAAGTTGGTG
GTGGCCTATGAAGAACTAAAGGGGAAACTTGAACACATGCAATCAAGAATCAAGGAAGCA
GCGAATGCGCTGAAGCCATGCTTAAATGCTGAATCGCCAGCAATTGCTCTGGCAGCATTG
CAAGAGTTAGAAGAGTTAGCAGCAGCAGGGGGGAATCCAGTGCAGCAAAATTGA

Peptide Sequence

PEP ID

XP_016472775.1
PEP Infomation

PREDICTED: translation initiation factor IF-2-like [Nicotiana tabacum]
Sequence

MDPSMDLPTTTESPTFNSAQVVNHAPTPTPPQPXYEEILRMITAAITALKERDGSSRIAI
AKYIDRVYTNLPPNHSALLTHHLKRLKNSGYLAMVKHSYMLAGPPGSAPPPPSADADSNG
VGTDVSSLSKRKPGRPPKLKPEAQPHAQPQVQAQVQFQDQFQAQLQAQLQAQLQAQQQQA
AQFQPQFQLIQQQPQYLPQQQFQPDPLLQPQQQFQTQPQTQAYATPEGHNYAGLGAESVF
VSLGLADGPVGVQNPAVGLAPAPGAEESTAKRRPGRPRKDGSTVVKPVEPKLPDQSGGSK
RRPGRPPKSVTVNAAPGSAMGSGRRGRPRKNSVPGRRGRPRKNAAVAAANGGANVANIPS
VGANVTNVPAGGVPGAITTPKRRGRPPRSSGPPAATVGVTDVPIAAAFDTENLPNAVGGG
GVTNNGALPPLGKRRGRPPKSYGAAAAAPTVKRPRKLSGKPLGRPRKNVTSPAVSDPKLV
VAYEELKGKLEHMQSRIKEAANALKPCLNAESPAIALAALQELEELAAAGGNPVQQN

Transcript Sequence

Gene sequence data has not been registered.